Group A | Pts | Games | W | D | L | GS | GA | GS-GA |
 PAOK | 12 | 6 | 3 | 3 | 0 | 10 | 6 | 4 |
 Rubin | 11 | 6 | 3 | 2 | 1 | 11 | 5 | 6 |
 Tottenham | 10 | 6 | 3 | 1 | 2 | 9 | 4 | 5 |
 Shamrock | 0 | 6 | 0 | 0 | 6 | 4 | 19 | -15 |
Group B | Pts | Games | W | D | L | GS | GA | GS-GA |
 Standard | 14 | 6 | 4 | 2 | 0 | 9 | 1 | 8 |
 Hannover | 11 | 6 | 3 | 2 | 1 | 9 | 7 | 2 |
 FC Cph. | 5 | 6 | 1 | 2 | 3 | 5 | 9 | -4 |
 Vorskla | 2 | 6 | 0 | 2 | 4 | 4 | 10 | -6 |
Group C | Pts | Games | W | D | L | GS | GA | GS-GA |
 PSV | 16 | 6 | 5 | 1 | 0 | 13 | 5 | 8 |
 Legia | 9 | 6 | 3 | 0 | 3 | 7 | 9 | -2 |
 H TelAviv | 7 | 6 | 2 | 1 | 3 | 10 | 9 | 1 |
 Rapid | 3 | 6 | 1 | 0 | 5 | 5 | 12 | -7 |
Group D | Pts | Games | W | D | L | GS | GA | GS-GA |
 Sporting | 12 | 6 | 4 | 0 | 2 | 8 | 4 | 4 |
 Lazio | 9 | 6 | 2 | 3 | 1 | 7 | 5 | 2 |
| Vaslui | 6 | 6 | 1 | 3 | 2 | 5 | 8 | -3 |
 Zurich | 5 | 6 | 1 | 2 | 3 | 5 | 8 | -3 |
Group E | Pts | Games | W | D | L | GS | GA | GS-GA |
 Beşiktaş | 12 | 6 | 4 | 0 | 2 | 13 | 7 | 6 |
| Stoke City | 11 | 6 | 3 | 2 | 1 | 10 | 7 | 3 |
| D.Kyiv | 7 | 6 | 1 | 4 | 1 | 7 | 7 | 0 |
| M TelAviv | 2 | 6 | 0 | 2 | 4 | 8 | 17 | -9 |
Group F | Pts | Games | W | D | L | GS | GA | GS-GA |
 Athletic | 13 | 6 | 4 | 1 | 1 | 11 | 8 | 3 |
 Salzburg | 10 | 6 | 3 | 1 | 2 | 11 | 8 | 3 |
 PSG | 10 | 6 | 3 | 1 | 2 | 8 | 7 | 1 |
 SK Slovan | 1 | 6 | 0 | 1 | 5 | 4 | 11 | -7 |
Group G | Pts | Games | W | D | L | GS | GA | GS-GA |
| Metalist | 14 | 6 | 4 | 2 | 0 | 15 | 6 | 9 |
| AZ | 8 | 6 | 1 | 5 | 0 | 10 | 7 | 3 |
| A Wien | 8 | 6 | 2 | 2 | 2 | 10 | 11 | -1 |
 Malmö | 1 | 6 | 0 | 1 | 5 | 4 | 15 | -11 |
Group H | Pts | Games | W | D | L | GS | GA | GS-GA |
| Braga | 11 | 6 | 3 | 2 | 1 | 12 | 6 | 6 |
| Cl.Brugge | 11 | 6 | 3 | 2 | 1 | 12 | 9 | 3 |
| Birminghm | 10 | 6 | 3 | 1 | 2 | 8 | 8 | 0 |
 Maribor | 1 | 6 | 0 | 1 | 5 | 6 | 15 | -9 |
Group I | Pts | Games | W | D | L | GS | GA | GS-GA |
| A.Madrid | 13 | 6 | 4 | 1 | 1 | 11 | 4 | 7 |
| Udinese | 9 | 6 | 2 | 3 | 1 | 6 | 7 | -1 |
 Celtic | 6 | 6 | 1 | 3 | 2 | 6 | 7 | -1 |
| Rennes | 3 | 6 | 0 | 3 | 3 | 5 | 10 | -5 |
Group J | Pts | Games | W | D | L | GS | GA | GS-GA |
| Schalke | 14 | 6 | 4 | 2 | 0 | 13 | 2 | 11 |
| FCSB | 8 | 6 | 2 | 2 | 2 | 9 | 11 | -2 |
| M Haifa | 6 | 6 | 2 | 0 | 4 | 10 | 12 | -2 |
 AEK | 5 | 6 | 1 | 2 | 3 | 4 | 11 | -7 |
Group K | Pts | Games | W | D | L | GS | GA | GS-GA |
| Twente | 13 | 6 | 4 | 1 | 1 | 14 | 7 | 7 |
| Wisła | 9 | 6 | 3 | 0 | 3 | 8 | 13 | -5 |
| Fulham | 8 | 6 | 2 | 2 | 2 | 9 | 6 | 3 |
| OB | 4 | 6 | 1 | 1 | 4 | 9 | 14 | -5 |
Group L | Pts | Games | W | D | L | GS | GA | GS-GA |
| Anderlcht | 18 | 6 | 6 | 0 | 0 | 18 | 5 | 13 |
| Lokomotiv | 12 | 6 | 4 | 0 | 2 | 14 | 11 | 3 |
| AEK | 3 | 6 | 1 | 0 | 5 | 8 | 15 | -7 |
| Sturm Graz | 3 | 6 | 1 | 0 | 5 | 5 | 14 | -9 |
Round of 32 |
Braga 0 - Beşiktaş 2
Beşiktaş 0 - Braga 1
|
Rubin 0 - Olympiacs 1
Olympiacs 1 - Rubin 0
|
Salzburg 0 - Metalist 4
Metalist 4 - Salzburg 1
|
Porto 1 - Man.City 2
Man.City 4 - Porto 0
|
FCSB 0 - Twente 1
Twente 1 - FCSB 0
|
Trabzon 1 - PSV 2
PSV 4 - Trabzon 1
|
Lokomotiv 2 - Athletic 1
Athletic 1 - Lokomotiv 0
|
Wisła 1 - Standard 1
Standard 0 - Wisła 0
|
Lazio 1 - A.Madrid 3
A.Madrid 1 - Lazio 0
|
Legia 2 - Sporting 2
Sporting 1 - Legia 0
|
Stoke City 0 - Valencia 1
Valencia 1 - Stoke City 0
|
Udinese 0 - PAOK 0
PAOK 0 - Udinese 3
|
Ajax 0 - Man.Utd 2
Man.Utd 1 - Ajax 2
|
V.Plzeň 1 - Schalke 1
Schalke 3 - V.Plzeň 1
|
AZ 1 - Anderlcht 0
Anderlcht 0 - AZ 1
|
Hannover 2 - Cl.Brugge 1
Cl.Brugge 0 - Hannover 1
|
Round of 16 |
Standard 2 - Hannover 2
Hannover 4 - Standard 0
|
Metalist 0 - Olympiacs 1
Olympiacs 1 - Metalist 2
|
AZ 2 - Udinese 0
Udinese 2 - AZ 1
|
Twente 1 - Schalke 0
Schalke 4 - Twente 1
|
Man.Utd 2 - Athletic 3
Athletic 2 - Man.Utd 1
|
Valencia 4 - PSV 2
PSV 1 - Valencia 1
|
Sporting 1 - Man.City 0
Man.City 3 - Sporting 2
|
A.Madrid 3 - Beşiktaş 1
Beşiktaş 0 - A.Madrid 3
|
Quarter-finals |
A.Madrid 2 - Hannover 1
Hannover 1 - A.Madrid 2
|
AZ 2 - Valencia 1
Valencia 4 - AZ 0
|
Sporting 2 - Metalist 1
Metalist 1 - Sporting 1
|
Schalke 2 - Athletic 4
Athletic 2 - Schalke 2
|
Semi-finals |
Sporting 2 - Athletic 1
Athletic 3 - Sporting 1
|
A.Madrid 4 - Valencia 2
Valencia 0 - A.Madrid 1
|
Final |
A.Madrid 3 - Athletic 0
|
Europa League